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My microbiota as a woman

How bacteria could transform sexual assault investigations

Research
The vaginal microbiota The urinary microbiota

Microbiome forensics may offer a groundbreaking method to track sexual assault suspects through unique bacterial signatures left during intercourse. These microbial “footprints” can persist for days, detection even possible when DNA evidence is scarce. This new identification method could therefore assist a large number of victims, especially in cases where DNA evidence is absent or degraded.

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About this article

Author

Dr Amine Zorgani
Created 20 June 2025
Updated 25 June 2025

For years, forensic investigations in sexual assault crime cases have leaned heavily on the analysis of human male DNA, often from sperm, found on the victim. But this isn't always straightforward. Getting enough viable sperm can be tricky, especially if sampling occurs more than 48 hours after an assault. This is where the microbiome – the vast community of microbes living in and on us – steps onto the forensic stage, offering a potential new avenue for detection and identifying perpetrators in sexual crime investigations. 

This new study 1 builds on previous work showing that microbial communities differ between body sites and individuals. If these unique microbial signatures transfer during sexual intercourse, could they leave a trace that traditional DNA methods might miss? That's the core question here, specifically focusing on the " (sidenote: Sexome The collection of microbial signatures exchanged specifically during sexual intercourse. ) " – the microbial exchange during sexual intercourse.

Science is offering new opportunities to address unsolved or difficult cases involving sexual violence. Victims of sexual crimes may benefit from this scientific progress.

Sex and your unique bacterial signature

The researcher recruited 12 consensual male/female couples participating in this science-driven study. Participants collected samples from their genital areas before and after penetrative sexual intercourse. The "before" samples were taken after a period of abstinence (at least 2-4 days). The "after" samples were collected 3 to 12 hours post-intercourse, mimicking a forensic sampling scenario. They then used full-length (sidenote: 16S rRNA sequencing A method that reads a bacterial “barcode” gene to identify and differentiate species. ) to analyse each sample. Think of the 16S gene as a bacterial barcode allowing for species-level resolution, which is absolutely critical for forensic applications.

Photo: Tout ce que vous avez toujours voulu savoir sur le microbiote du sexe des hommes (sans jamais oser le demander) 02.06.2023 Everything you always wanted to know about penile microbiota (but were afraid to ask) Read more

As expected, male penis skin samples were generally more diverse than female vaginal samples. Couples showed different levels of microbial similarity after sex depending on their baseline profiles. So being in a couple has a significant impact on the overall composition of bacteria found.

They also saw a clear disruption to the microbial communities in both male and female samples after intercourse. Bacterial types transferred between partners.

Bacteria typically found on male skin (like Corynebacterium, Staphylococcus, Finegoldia) increased in female samples, while key vaginal bacteria (Lactobacillus species) increased in male samples.

Urethral microbiota: a better understanding of male urinary tract infections

Read more

Surprising findings with forensic impact

What was surprising, even with condoms, bacteria still transfer, mostly woman to man, leaving microbial evidence behind them. Unique female-only bacteria stayed on a male partner for five days despite hygiene, extending forensic detection beyond sperm DNA. Plus, novel germs from gut or skin can appear in the genitals after sex, potentially offering fresh contact clues. This could add new dimensions to sexual assault cases.

Forensic promise: a new tool for justice

The key takeaway is clear: specific bacterial signatures transfer during sexual intercourse. Using high-resolution sequencing techniques allows forensic scientists to potentially identify unique bacterial types.

The study shows compelling evidence that microbiome analysis could offer a valuable additional tool for sexual assault investigations, especially when male DNA is limited or absent. It also demonstrates that the microscopic exchange of bacteria during sexual contact leaves a detectable, high-resolution trace – a " (sidenote: Sexome The collection of microbial signatures exchanged specifically during sexual intercourse. ) " signature – that holds significant promise for helping forensic investigators pursue justice. 

The vaginal microbiota

Learn more
Source

1. Dixon R, Egan S, Payne M, et al. 2025 Bacterial transfer during sexual intercourse as a tool for forensic detection. iScience

Tags
Vaginal microbiota Semen Biomarker Research Penis Microbiome Flora

    See also

    Actu GP : Le sperme, reflet du microbiote intime de l’homme Semen, a reflection of a man’s intimate microbiota
    Male infertility: are bacteria in semen involved?
    Created 20 June 2025
    Updated 25 June 2025

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