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  3. Viral diarrhea: when a devious virus invites itself into our intestines
The power of your gut

Viral diarrhea: when a devious virus invites itself into our intestines

Diarrhea
The gut microbiota Travelers’ diarrhea Antibiotic-associated diarrhea

Infectious diarrhea can be caused by bacteria (bacterial diarrhea), parasites (parasitic diarrhea) or viruses (viral diarrhea). Five main viruses are implicated in viral diarrhea. The first of these is rotavirus, the main cause of diarrhea-associated deaths in children under 5 years old. And this in spite of the vaccination of infants against this terrible virus since 2006. The effectiveness of the vaccination appears to be lower in low-income countries, due undoubtedly to the composition of the gut microbiota.

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About this article

Created 23 April 2024
Updated 30 September 2024

What is viral diarrhea?

Diarrhea is defined as the passage of at least three loose or liquid stools per day, and infectious diarrhea is diarrhea caused by infection by a pathogen (virus, bacteria, or parasite). 1-3  If the pathogen is a virus, the diarrhea is said to be “viral”.

Viral, bacterial and parasitic diarrhea are not the same thing

Under the broad umbrella of diarrhea, while there are some kinds that are non-infectious (e.g. in the case of a digestive disease such as Crohn’s disease), the great majority are caused by a pathogenic infection. Depending on the pathogen involved, we talk about:

  • viral diarrhea if the culprit is a virus (e.g. rotavirus, which affects many infants);
  • bacterial diarrhea if a bacterium is responsible (e.g. Vibrio cholerae, which is responsible for cholera epidemics);
  • parasitic diarrhea if a parasite is the root cause (e.g. the mini-parasite composed of a single cell of Giardia intestinalis, which is responsible for the disease called giardiasis, dreaded by tourists, or the worm known as roundworm, dreaded by parents of young children).

Lastly, diarrhea can also be a common side effect (in up to 35% of patients) 4,5 of antibiotic treatment. This is known as antibiotic-associated diarrhea.

Which viruses are responsible?

While rotavirus is the deadliest (210,000 estimated deaths in 2016 among children under the age of 5), it is far from the only virus responsible for acute diarrhea or even death: adenovirus, norovirus, sapovirus and astrovirus each kill between 17,000 and 37,000 young children every year. 6

Note: SARS-Cov-2, the code name of the virus responsible for the COVID-19 pandemic, can also cause diarrhea. However, the frequency of these cases is difficult to quantify. Figures vary widely from one study to another, with some researchers reporting an incidence rate of diarrhea in 2% of cases, others in 50%! 7

Photo: Covid-19: is microbiota the missing clue? 09.05.2023 Covid-19: is microbiota the missing clue? Read more

How does a small virus cause acute viral diarrhea?

In viral diarrhea, as in infectious diarrhea in general, it all begins with a confrontation between a pathogen (in this case a virus) and the host. The outcome of this confrontation depends on complex equilibriums, which largely involve the gut microbiota: in mice, for example, certain bacteria seem to be able to prevent or even cure a rotavirus infection. 8 The same virus will thus have a different effect depending on the state of the gut microbiota of the infected person. A less diversified microbiota would be more susceptible to the virus. 12

When the virus gains the upper hand, the process is always essentially the same: the virus infects the cells that line the small intestine and causes lesions that hinder the absorption of fluids. 9 The result is very liquid diarrhea (but without the presence of blood) which may be accompanied by other symptoms such as vomiting, nausea, abdominal cramps and fever. 10 This is the famous viral gastroenteritis, which reappears every winter. Particularly severe in the case of infection by rotavirus, which causes more pronounced symptoms, it is usually accompanied by dysbiosis of the gut microbiota, unsettled by the invasion of this virus. 11,12

03.11.2021 Have you heard of "dysbiosis"? Read more

How to prevent viral diarrhea?

Given the danger of rotavirus for frail individuals, preventive vaccines have been developed to reduce its mortality rate in young children. It is estimated that the vaccination of infants against rotavirus prevented 139,000 deaths in children under the age of five in the period 2006 to 2019. This figure is considered to be both significant yet low considering the hopes pinned on the vaccination: the vaccine seems to be less effective in low- or moderate-income countries (which are paradoxically the most affected).

Among the factors that might explain this lower effectiveness is the composition of the body’s microbiota, which affects the immune response to the vaccination in the gut. 13-16 To this preventive measure, of course, are added the advice of hygiene and social distancing, which apply to all types of infectious diarrhea.

Preventing diarrhea with hygiene practices

Infectious diarrhea, whether caused by bacteria, viruses or parasites, can be prevented above all by hygiene practices:

  • careful and frequent hand-washing (after using the toilet, before eating, etc.),
  • cleansing of kitchen work surfaces,
  • use of clean water,
  • distancing from people who are sick, etc.

With water contamination by fecal material being responsible for a large percentage of such infections, infectious diarrhea is most frequent where clean water is lacking (low-income countries, makeshift camps, temporary living quarters after an earthquake, etc.).

How to treat viral diarrhea?

Very common and usually not serious, viral diarrhea can nonetheless lead to severe dehydration in the most frail individuals (infants, malnourished children, immunocompromised adults, the elderly). Treatment focuses on fighting the loss of water and electrolytes (e.g. replenishing lost sodium, potassium and chloride ions):

  • orally (with oral rehydration solutions, or ORS);
  • or intravenously in the most serious cases.

Health professionals may also recommend certain probiotic strains to treat acute gastroenteritis in children. These good bacteria reduce the duration of diarrhea, and/or the duration of hospitalization, and/or the quantity of stools (ESPGHAN 2023).

No antibiotics for viruses

Just as it wouldn’t occur to you to use a fly swatter to get rid of a mouse or a mousetrap to catch a fly, antibiotics are ineffective against viruses. Antibiotics kill bacteria, not viruses. Even worse, in some cases, antibiotics cause diarrhea as a side effect - which would be most unwelcome for a patient already suffering from viral diarrhea!

Key points to remember

  • Diarrhea is defined as the passage of at least three loose or liquid stools per day, and infectious diarrhea is diarrhea caused by infection by a pathogen (virus, bacteria, or parasite). Due to the resulting dehydration, diarrhea was responsible for 1.6 million deaths in 2016, mainly among malnourished or immunocompromised children or people living with HIV. 1-3
  • In cases of infection by a virus, diarrhea is said to be “viral”. The rotavirus virus causes the most deaths, followed, far behind, by adenovirus, norovirus, sapovirus and astrovirus. 6
  • Sometimes, the gut microbiota manage to counter the infection; at other times, the virus kills the gut microbiota and causes watery diarrhea, which may be combined with other symptoms  such as vomiting, nausea, abdominal cramps and fever. This is viral gastroenteritis. 10
  • Prevention of viral diarrhea rests on the vaccination of infants against rotavirus (less effective in low- or moderate-income countries), access to clean drinking water, and hygiene and social distancing practices which apply to all types of infectious diarrhea. 13-16
  • The treatment of viral diarrhea focuses on fighting dehydration. Certain probiotic strains can be prescribed for the treatment of acute gastroenteritis in children (ESPGHAN 2023). Antibiotics, on the other hand, are ineffective against viruses and can also worsen the diarrhea.

Behind the scenes of infectious diarrhea: the role of microbiota

Read more
Sources

1. WHO Fact Sheet 2024

2. Iancu MA, Profir M, Roşu OA, Ionescu RF, Cretoiu SM, Gaspar BS. Revisiting the Intestinal Microbiome and Its Role in Diarrhea and Constipation. Microorganisms. 2023 Aug 29;11(9):2177. 

3. Sokic-Milutinovic A, Pavlovic-Markovic A, Tomasevic RS, Lukic S. Diarrhea as a Clinical Challenge: General Practitioner Approach. Dig Dis. 2022;40(3):282-289.

4. McFarland LV, Ozen M, Dinleyici EC et al. Comparison of pediatric and adult antibiotic-associated diarrhea and Clostridium difficile infections. World J Gastroenterol. 2016;22(11):3078-3104

5. Theriot CM, Young VB. Interactions Between the Gastrointestinal Microbiome and Clostridium difficile. Annu Rev Microbiol. 2015;69:445-461.

6. Cohen AL, Platts-Mills JA, Nakamura T  et al. Aetiology and incidence of diarrhea requiring hospitalisation in children under 5 years of age in 28 low-income and middle-income countries: findings from the Global Pediatric Diarrhea Surveillance network. BMJ Glob Health. 2022 Sep;7(9):e009548. 

7. D'Amico F, Baumgart DC, Danese S, Peyrin-Biroulet L. Diarrhoea During COVID-19 Infection: Pathogenesis, Epidemiology, Prevention, and Management. Clin Gastroenterol Hepatol. 2020 Jul;18(8):1663-1672. 

8. Shi Z, Zou J, Zhang Z, Zhao X, Noriega J, Zhang B, Zhao C, Ingle H, Bittinger K, Mattei LM, Pruijssers AJ, Plemper RK, Nice TJ, Baldridge MT, Dermody TS, Chassaing B, Gewirtz AT. Segmented Filamentous Bacteria Prevent and Cure Rotavirus Infection. Cell. 2019 Oct 17;179(3):644-658.e13.

9. Iturriza-Gómara M, Cunliffe NA. 34 - Viral Gastroenteritis. Editor(s): Edward T. Ryan, David R. Hill, Tom Solomon, Naomi E. Aronson, Timothy P. Endy, Hunter's Tropical Medicine and Emerging Infectious Diseases (Tenth Edition), Elsevier, 2020, Pages 289-307. ISBN 9780323555128. 

10. Bányai K, Estes MK, Martella V, Parashar UD. Viral gastroenteritis. Lancet. 2018 Jul 14;392(10142):175-186. 

11. Sohail MU, Al Khatib HA, Al Thani AA, Al Ansari K, Yassine HM, Al-Asmakh M. Microbiome profiling of rotavirus infected children suffering from acute gastroenteritis. Gut Pathog. 2021 Mar 29;13(1):21. 

12. Mizutani T, Ishizaka A, Koga M, Tsutsumi T, Yotsuyanagi H. Role of Microbiota in Viral Infections and Pathological Progression. Viruses. 2022 May 1;14(5):950. 

13. Huang B, Wang J, Li L. Recent five-year progress in the impact of gut microbiota on vaccination and possible mechanisms. Gut Pathog. 2023 Jun 12;15(1):27. Erratum in: Gut Pathog. 2023 Jul 10;15(1):34.

14. Magwira CA, Taylor MB. Composition of gut microbiota and its influence on the immunogenicity of oral rotavirus vaccines. Vaccine. 2018 Jun 7;36(24):3427-3433. 

15. Lynn DJ, Benson SC, Lynn MA, Pulendran B. Modulation of immune responses to vaccination by the microbiota: implications and potential mechanisms. Nat Rev Immunol. 2022 Jan;22(1):33-46. 

16. Zimmermann P. The immunological interplay between vaccination and the intestinal microbiota. NPJ Vaccines. 2023 Feb 23;8(1):24.

Tags
Antibiotic-associated diarrhea Travelers' diarrhea Gut Gut microbiota Water Microbiome Flora

    See also

    Parasitic diarrhea: microbiota, a key prognostic element?
    Bacterial diarrhea: the only case where antibiotics can be used
    Created 23 April 2024
    Updated 30 September 2024

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